{
  "_id": "6a27b62d24555f66ed538e25",
  "Package": "GENEAcore",
  "Title": "Pre-Processing of 'GENEActiv' Data",
  "Version": "1.2.0",
  "Date": "2026-03-30",
  "Authors@R": "c(\nperson(\"Joss\", \"Langford\", email = \"joss@activinsights.com\", role = \"aut\"),\nperson(\"Ian\", \"Long\", email = \"ilong@stoatgroup.com\", role = \"aut\"),\nperson(\"Jia Ying\", \"Chua\", email = \"jiayingc@activinsights.com\", role = c(\"aut\",\"cre\")),\nperson(\"Activinsights Ltd\", role = \"cph\", email = \"info@activinsights.com\"))",
  "Maintainer": "Jia Ying Chua <jiayingc@activinsights.com>",
  "Description": "Analytics to read in and segment raw 'GENEActiv'\naccelerometer data into epochs and events. For more details on\nthe 'GENEActiv' device, see\n<https://activinsights.com/resources/geneactiv-support-1-2/>.",
  "License": "GPL (>= 2)",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "VignetteBuilder": "knitr",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-09 06:22:29 UTC",
    "User": "root"
  },
  "Author": "Joss Langford [aut], Ian Long [aut], Jia Ying Chua [aut, cre],\nActivinsights Ltd [cph]",
  "Repository": "https://ai-jyc.r-universe.dev",
  "Date/Publication": "2026-04-02 15:31:41 UTC",
  "RemoteUrl": "https://github.com/cran/GENEAcore",
  "RemoteRef": "HEAD",
  "RemoteSha": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
  "MD5sum": "59f15e4812bfc1a7b16c5dc44e1a0a26",
  "_user": "ai-jyc",
  "_type": "src",
  "_file": "GENEAcore_1.2.0.tar.gz",
  "_fileid": "4505ab255d03909f74c4ae5dcd79cd8b381fcebacbbad5b0423e98dc0c0c9d7e",
  "_filesize": 2662553,
  "_sha256": "4505ab255d03909f74c4ae5dcd79cd8b381fcebacbbad5b0423e98dc0c0c9d7e",
  "_created": "2026-06-09T06:22:29.000Z",
  "_published": "2026-06-09T06:43:56.991Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 80261032213,
      "time": 165,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7500042032"
    },
    {
      "job": 80261032217,
      "time": 168,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7500042540"
    },
    {
      "job": 80261032224,
      "time": 135,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7500334084"
    },
    {
      "job": 80261032197,
      "time": 138,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7500334810"
    },
    {
      "job": 80260644783,
      "time": 177,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7499998097"
    },
    {
      "job": 80261032208,
      "time": 111,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7500027401"
    },
    {
      "job": 80261032232,
      "time": 231,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7500059686"
    },
    {
      "job": 80261032243,
      "time": 156,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7500039276"
    },
    {
      "job": 80261032240,
      "time": 157,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7500039509"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cran/GENEAcore",
  "_commit": {
    "id": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
    "author": "Jia Ying Chua <jiayingc@activinsights.com>",
    "committer": "cran-robot <csardi.gabor+cran@gmail.com>",
    "message": "version 1.2.0\n",
    "time": 1775143901
  },
  "_maintainer": {
    "name": "Jia Ying Chua",
    "email": "jiayingc@activinsights.com",
    "login": "ai-jyc",
    "description": "",
    "uuid": 158163650
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "changepoint",
      "role": "Imports"
    },
    {
      "package": "signal",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "GENEAread",
      "version": ">= 2.0.10",
      "role": "Suggests"
    },
    {
      "package": "GENEAclassify",
      "role": "Suggests"
    }
  ],
  "_owner": "cran",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-47",
      "n": 1
    },
    {
      "week": "2026-14",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "1.1.2",
      "date": "2025-11-21"
    },
    {
      "name": "1.2.0",
      "date": "2026-04-02"
    }
  ],
  "_stars": 0,
  "_contributors": [
    {
      "user": "ai-jyc",
      "count": 4,
      "uuid": 158163650
    }
  ],
  "_userbio": {
    "uuid": 158163650,
    "type": "user",
    "name": "AI-jyc"
  },
  "_downloads": {
    "count": 164,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/GENEAcore"
  },
  "_searchresults": 3,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/GENEAcore.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_realowner": "ai-jyc",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2025-04-01"
    },
    {
      "version": "1.0.1",
      "date": "2025-04-09"
    },
    {
      "version": "1.1.2",
      "date": "2025-11-21"
    },
    {
      "version": "1.2.0",
      "date": "2026-04-02"
    }
  ],
  "_exports": [
    "aggregate_epochs",
    "aggregate_events",
    "aggregateEpochs",
    "aggregateEvents",
    "aggregatePeriods",
    "apply_AGSA",
    "apply_all",
    "apply_calibration",
    "apply_degrees",
    "apply_ENMO",
    "apply_radians",
    "apply_updown",
    "binfile_summary",
    "bouts_decision_tree",
    "calc_autocalparams",
    "check_MPI",
    "create_coel_atoms_json",
    "create_event_mapping",
    "create_MPI",
    "createEventMapping",
    "cx_percentile",
    "detect_nonmovement",
    "detect_transitions",
    "expected_last_timestamp",
    "find_rest_intervals",
    "folder_measures",
    "fx_count",
    "geneabout",
    "geneacore",
    "geneacore_part1",
    "geneacore_part2",
    "geneacore_part3",
    "geneacore_part4",
    "get_cut_times",
    "get_events",
    "get_UniqueBinFileIdentifier",
    "get_UniqueBinFileIdentifier.dir",
    "get_UniqueBinFileIdentifier.filepath",
    "get_UniqueBinFileIdentifier.vector",
    "identifier_mapping",
    "MPI_summary",
    "mx_lx_window",
    "nonwear_rest_coverage",
    "remove_short_transitions",
    "sample_binfile",
    "single_file_measures",
    "step_counter",
    "stepCounter",
    "valid_day_nonwear",
    "weighted_mean",
    "weighted_sum"
  ],
  "_help": [
    {
      "page": "aggregate_epochs",
      "title": "Aggregate Epochs",
      "topics": [
        "aggregateEpochs",
        "aggregate_epochs"
      ]
    },
    {
      "page": "aggregate_events",
      "title": "Aggregate Events",
      "topics": [
        "aggregateEvents",
        "aggregatePeriods",
        "aggregate_events",
        "createEventMapping"
      ]
    },
    {
      "page": "apply_AGSA",
      "title": "Apply Absolute Gravity-Subtracted Acceleration (AGSA)",
      "topics": [
        "apply_AGSA"
      ]
    },
    {
      "page": "apply_calibration",
      "title": "Apply Calibration",
      "topics": [
        "apply_calibration"
      ]
    },
    {
      "page": "apply_degrees",
      "title": "Apply Rotation (Degrees)",
      "topics": [
        "apply_degrees"
      ]
    },
    {
      "page": "apply_ENMO",
      "title": "Apply Euclidean Norm Minus One (ENMO)",
      "topics": [
        "apply_ENMO"
      ]
    },
    {
      "page": "apply_radians",
      "title": "Apply Rotation (radians)",
      "topics": [
        "apply_radians"
      ]
    },
    {
      "page": "apply_updown",
      "title": "Apply Elevation (UpDown)",
      "topics": [
        "apply_updown"
      ]
    },
    {
      "page": "binfile_summary",
      "title": "Bin File Summary",
      "topics": [
        "binfile_summary"
      ]
    },
    {
      "page": "calc_autocalparams",
      "title": "Calculate Auto-calibration Parameters",
      "topics": [
        "calc_autocalparams"
      ]
    },
    {
      "page": "check_MPI",
      "title": "Print out a summary of MPI file(s)",
      "topics": [
        "check_MPI"
      ]
    },
    {
      "page": "create_coel_atoms_json",
      "title": "Create COEL Behavioural Atoms JSON",
      "topics": [
        "create_coel_atoms_json"
      ]
    },
    {
      "page": "create_MPI",
      "title": "Create Measurement Period Information",
      "topics": [
        "create_MPI"
      ]
    },
    {
      "page": "detect_nonmovement",
      "title": "Detect Non-movement",
      "topics": [
        "detect_nonmovement"
      ]
    },
    {
      "page": "detect_transitions",
      "title": "Detect Transitions",
      "topics": [
        "detect_transitions"
      ]
    },
    {
      "page": "folder_measures",
      "title": "Daily Measures for Data Folder",
      "topics": [
        "folder_measures"
      ]
    },
    {
      "page": "geneabout",
      "title": "GENEAbout",
      "topics": [
        "geneabout"
      ]
    },
    {
      "page": "geneacore",
      "title": "GENEAcore Main Wrapper",
      "topics": [
        "geneacore"
      ]
    },
    {
      "page": "geneacore_part1",
      "title": "GENEAcore Part 1",
      "topics": [
        "geneacore_part1"
      ]
    },
    {
      "page": "geneacore_part2",
      "title": "GENEAcore Part 2",
      "topics": [
        "geneacore_part2"
      ]
    },
    {
      "page": "geneacore_part3",
      "title": "GENEAcore Part 3",
      "topics": [
        "geneacore_part3"
      ]
    },
    {
      "page": "geneacore_part4",
      "title": "GENEAcore Part 4",
      "topics": [
        "geneacore_part4"
      ]
    },
    {
      "page": "get_UniqueBinFileIdentifier",
      "title": "Generate Unique Bin File Identifier",
      "topics": [
        "get_UniqueBinFileIdentifier"
      ]
    },
    {
      "page": "MPI_summary",
      "title": "MPI Summary",
      "topics": [
        "MPI_summary"
      ]
    },
    {
      "page": "sample_binfile",
      "title": "Sample Bin File",
      "topics": [
        "sample_binfile"
      ]
    },
    {
      "page": "step_counter",
      "title": "Step Counter",
      "topics": [
        "stepCounter",
        "step_counter"
      ]
    }
  ],
  "_readme": "https://github.com/cran/GENEAcore/raw/HEAD/README.md",
  "_rundeps": [
    "changepoint",
    "jsonlite",
    "lattice",
    "MASS",
    "signal",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "breaking-changes.Rmd",
      "filename": "breaking-changes.html",
      "title": "Breaking Changes",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Function Name Changes",
        "Parameter Name Changes",
        "MPI Name Changes"
      ],
      "created": "2025-11-21 17:20:02",
      "modified": "2025-11-21 17:20:02",
      "commits": 1
    },
    {
      "source": "GENEAcore.Rmd",
      "filename": "GENEAcore.html",
      "title": "GENEAcore",
      "author": "ActivInsights Ltd",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Introduction and Installation",
        "i. Introduction",
        "ii. Install R and RStudio",
        "iii. Install and Load Package",
        "Using GENEAcore",
        "i. Folder preparation",
        "ii. geneacore() wrapper function",
        "iii. Expected outputs",
        "iv. Bin file summary",
        "v. MPI summary",
        "vi. Other ways to use geneacore",
        "Individual access to GENEAcore functions",
        "i. Sampling your files",
        "ii. Creating calibration values from your data",
        "iii. Applying calibration values to your data",
        "iv. Detecting transitions in your data for event aggregation",
        "v. Applying calculations to raw data to obtain additional measures",
        "vi. Get events indices from transitions",
        "vii. Aggregating your raw data into epochs/events",
        "GENEAbout",
        "i. geneabout() wrapper function",
        "ii. Expected outputs",
        "Individual access to GENEAbout functions",
        "i. Rest intervals",
        "ii. Nonwear and rest coverage",
        "iii. Decision tree",
        "COEL Behavioural Atoms 2.0",
        "Appendix",
        "i. GENEAcore functions flowchart",
        "ii. Sample code to loop functions for a folder of files",
        "iii. Sample code to aggregate events by day",
        "Citation"
      ],
      "created": "2025-04-01 16:30:10",
      "modified": "2026-04-02 15:31:41",
      "commits": 4
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "geneacore",
  "_universes": [
    "ai-jyc"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.2.0",
      "date": "2026-06-09T06:24:34.000Z",
      "distro": "noble",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "48f7b6f404b1c6da76c639e4b58201db11c9832e88d0e42432bbe338faf44429",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.2.0",
      "date": "2026-06-09T06:24:34.000Z",
      "distro": "noble",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "da37fb48c5f95b9948d5714ff8f62c25265e2c4deb8c0ec96c8731630a6c6eed",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.2.0",
      "date": "2026-06-09T06:42:43.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "765963f31cb75e035cff357cd264ac518315506c40690d7c38bc7c9e0b9600af",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.2.0",
      "date": "2026-06-09T06:42:43.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "05b0a649ba08ccbdba2bc500411b8e3732bfdd1f61fe30326bcb6f2905bc82ad",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.2.0",
      "date": "2026-06-09T06:24:37.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "7330044819677c2a589f86d8758dcb99cc70b3c8697208da8e92b622ae292b75",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.2.0",
      "date": "2026-06-09T06:25:02.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "e6014d09ec5821e33e7904cd369a24c5540abeca08112942def37aad38870b6c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.2.0",
      "date": "2026-06-09T06:23:54.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "7b407045f3f071b032b561871f10cbac01433baa4b71ae10973d1db49e3c2a3f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.2.0",
      "date": "2026-06-09T06:24:01.000Z",
      "commit": "944bda7b35786c9b9f48c32c35b6394afa93d23a",
      "fileid": "e9d6aef0d24aa6a1efc85800f490773871e16364b38e835aad8f5a2b9bdc297c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ai-jyc/actions/runs/27187802897"
    }
  ]
}